Brain Imaging

Documentation for the Matlab GUI version (No longer supported)

• Code is stored in /apps/dev/FieldMap/matlab
• Access the new code by running "fmc" from the matlab prompt or by inserting it in your script.
• Instructions for using the GUI
  • FMC_1
  • FMC_II (Current Version)
• Scripts
  • Sample script for correcting analyze images.
  • Sample script for correcting stimulate images.
• The following commands will set the path variable in Matlab correctly:

    com_flag = computer
  if com_flag(1:2) == 'PC'
  %   addpath Y:/lee/Matlab
      addpath W:/dev/FieldMap/matlab
      addpath W:/dev/FieldMap/matlab
      addpath W:/dev/FieldMap/matlab/FMC_DTI
      addpath W:/dev/FieldMap/matlab/FMC
  else
  %   addpath /study/lee/Matlab
      addpath /apps/dev/FieldMap/matlab
      addpath /apps/dev/FieldMap/matlab
      addpath /apps/dev/FieldMap/matlab/FMC_DTI
      addpath /apps/dev/FieldMap/matlab/FMC
  end